Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is91 family transposase | FD722_00015 | Not Available | Positive | 1047 - 1841 | 28984.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1838 - 1953 | Not Available |
| duf3363 domain-containing protein | FD722_00020 | Not Available | Positive | 1872 - 2756 | 33025.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2093 - 2208 | Not Available |
| chloramphenicol/florfenicol efflux mfs transporter flor | FD722_00025 | Not Available | Positive | 2973 - 4187 | 42715.4 |
| lysr family transcriptional regulator | FD722_00030 | Not Available | Positive | 4215 - 4520 | 11146.6 |
| is91 family transposase | FD722_00035 | Not Available | Positive | 4632 - 5171 | 20414.6 |
| aminoglycoside o-phosphotransferase aph(6)-id | FD722_00040 | Not Available | Negative | 5143 - 5979 | 30825.7 |
| aminoglycoside o-phosphotransferase aph(3'')-ib | FD722_00045 | Not Available | Negative | 5979 - 6782 | 29588.2 |
| sulfonamide-resistant dihydropteroate synthase sul2 | FD722_00050 | Not Available | Negative | 6843 - 7658 | 28471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
