Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD722_06800 | Not Available | Positive | 1521683 - 1521886 | 7482.15 |
| Major tail sheath protein | FD722_06805 | Not Available | Positive | 1521883 - 1523058 | 42617.9 |
| Putative tail tube protein | FD722_06810 | Not Available | Positive | 1523051 - 1523542 | 17554.3 |
| phage tail assembly protein | FD722_06815 | Not Available | Positive | 1523610 - 1524179 | 22033.4 |
| Phage-related tail protein | FD722_06820 | Not Available | Positive | 1524292 - 1527201 | 101185.0 |
| Putative tail protein | FD722_06825 | Not Available | Positive | 1527210 - 1527578 | 13509.3 |
| Phage tail x | FD722_06830 | Not Available | Positive | 1527575 - 1527778 | 7840.45 |
| Tail protein | FD722_06835 | Not Available | Positive | 1527781 - 1528755 | 35951.7 |
| Integrase | FD722_06840 | Not Available | Positive | 1528755 - 1530029 | 49535.1 |
| is4 family transposase | FD722_00005 | Not Available | Positive | 1 - 145 | 5213.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
