Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage baseplate assembly protein v | FD722_06750 | Not Available | Positive | 1515944 - 1516528 | 21343.1 |
| Putative baseplate assembly protein | FD722_06755 | Not Available | Positive | 1516525 - 1516857 | 12096.1 |
| Baseplate assembly protein | FD722_06760 | Not Available | Positive | 1516854 - 1517831 | 37143.4 |
| Phage tail protein i | FD722_06765 | Not Available | Positive | 1517815 - 1518564 | 27538.8 |
| Putative tail protein | FD722_06770 | Not Available | Positive | 1518558 - 1519079 | 19364.2 |
| Hypothetical protein | FD722_06775 | Not Available | Positive | 1519085 - 1519465 | 13723.2 |
| Hypothetical protein | FD722_06780 | Not Available | Positive | 1519458 - 1519760 | 10514.8 |
| Putative tail fiber protein | FD722_06785 | Not Available | Positive | 1519769 - 1520422 | 22816.9 |
| Hypothetical protein | FD722_06790 | Not Available | Positive | 1520426 - 1521343 | 33627.3 |
| Orf38 | FD722_06795 | Not Available | Positive | 1521353 - 1521625 | 11012.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
