Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD722_06700 | Not Available | Positive | 1507850 - 1508083 | 8977.6 |
| hypothetical protein | FD722_06705 | Not Available | Positive | 1508094 - 1508564 | 17477.9 |
| Bacteriophage dna packaging protein | FD722_06710 | Not Available | Positive | 1508545 - 1510638 | 79680.4 |
| hypothetical protein | FD722_06715 | Not Available | Positive | 1510635 - 1510844 | 8207.1 |
| Putative portal protein | FD722_06720 | Not Available | Positive | 1510837 - 1512324 | 56328.6 |
| Head maturation protease | FD722_06725 | Not Available | Positive | 1512308 - 1514284 | 71774.9 |
| hypothetical protein | FD722_06730 | Not Available | Positive | 1514348 - 1514671 | 11160.3 |
| hypothetical protein | FD722_06735 | Not Available | Positive | 1514675 - 1515010 | 12470.1 |
| Hypothetical protein | FD722_06740 | Not Available | Positive | 1514991 - 1515506 | 19772.6 |
| hypothetical protein | FD722_06745 | Not Available | Positive | 1515472 - 1515963 | 18927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
