Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 89dp-OG16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | FD722_06650 | Not Available | Positive | 1499747 - 1500298 | 20716.9 |
| Hypothetical protein | FD722_06655 | Not Available | Positive | 1500447 - 1501322 | 33101.1 |
| Bacteriophage dna replication protein | FD722_06660 | Not Available | Positive | 1501319 - 1502044 | 27655.2 |
| hypothetical protein | FD722_06665 | Not Available | Positive | 1502041 - 1502619 | 21682.6 |
| slatt domain-containing protein | FD722_06670 | Not Available | Positive | 1502780 - 1503379 | 23081.1 |
| Hypothetical protein | FD722_06675 | Not Available | Positive | 1503372 - 1504559 | 46438.3 |
| Dna binding protein | FD722_06680 | Not Available | Positive | 1504552 - 1506474 | 75593.8 |
| Holin protein | FD722_06685 | Not Available | Positive | 1506767 - 1506982 | 8236.08 |
| Hypothetical protein | FD722_06690 | Not Available | Positive | 1506960 - 1507502 | 19592.2 |
| hypothetical protein | FD722_06695 | Not Available | Positive | 1507564 - 1507872 | 11696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
