Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | FD720_00005 | Not Available | Negative | 40 - 342 | 11074.5 |
| sulfonamide-resistant dihydropteroate synthase sul2 | FD720_00010 | Not Available | Negative | 429 - 1244 | 28471.1 |
| hypothetical protein | FD720_00020 | Not Available | Positive | 1581 - 1784 | 7297.65 |
| hypothetical protein | FD720_00025 | Not Available | Positive | 1775 - 1996 | 8377.94 |
| plasmid recombination enzyme | FD720_00030 | Not Available | Negative | 2231 - 3217 | 37185.1 |
| hypothetical protein | FD720_00035 | Not Available | Positive | 3266 - 3502 | 8397.48 |
| duf3363 domain-containing protein | FD720_00040 | Not Available | Positive | 4303 - 5016 | 26308.1 |
| chloramphenicol/florfenicol efflux mfs transporter flor | FD720_00045 | Not Available | Positive | 5293 - 6507 | 42616.3 |
| lysr family transcriptional regulator | FD720_00050 | Not Available | Positive | 6535 - 6840 | 11146.6 |
| is91 family transposase | FD720_00055 | Not Available | Positive | 6952 - 7514 | 21322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
