Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein trac | FD720_00360 | Not Available | Negative | 57357 - 59807 | 92552.0 |
| dsbc family protein | FD720_00365 | Not Available | Negative | 59804 - 60508 | 25909.5 |
| duf4165 domain-containing protein | FD720_00370 | Not Available | Negative | 60664 - 66084 | 199708.0 |
| conjugal transfer protein traa | FD720_00375 | Not Available | Negative | 66292 - 66522 | 7636.46 |
| hypothetical protein | FD720_00380 | Not Available | Positive | 66782 - 67834 | 40336.6 |
| para family protein | FD720_00385 | Not Available | Positive | 68498 - 69280 | 28487.4 |
| parb/repb/spo0j family partition protein | FD720_00390 | Not Available | Positive | 69282 - 70472 | 43897.1 |
| arsr family transcriptional regulator | FD720_00395 | Not Available | Positive | 70485 - 70757 | 10626.0 |
| asch domain-containing protein | FD720_00400 | Not Available | Positive | 70898 - 71173 | 10898.2 |
| hypothetical protein | FD720_00405 | Not Available | Positive | 71191 - 71493 | 11326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
