Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_00315 | Not Available | Negative | 47656 - 47979 | 11949.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 48165 - 48347 | Not Available |
| duf1845 domain-containing protein | FD720_00320 | Not Available | Positive | 48300 - 48950 | 24484.8 |
| hypothetical protein | FD720_00325 | Not Available | Negative | 49051 - 50379 | 50433.6 |
| conjugal transfer mating pair stabilization protein tran | FD720_00330 | Not Available | Negative | 50595 - 53375 | 99483.3 |
| conjugal transfer protein trau | FD720_00335 | Not Available | Negative | 53571 - 54578 | 35892.9 |
| eal domain-containing protein | FD720_00340 | Not Available | Negative | 54575 - 55279 | 26188.6 |
| conjugal transfer protein traw | FD720_00345 | Not Available | Negative | 55276 - 56532 | 46851.5 |
| s26 family signal peptidase | FD720_00350 | Not Available | Negative | 56507 - 57022 | 19452.6 |
| hypothetical protein | FD720_00355 | Not Available | Negative | 57019 - 57339 | 11282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
