Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_00265 | Not Available | Negative | 36072 - 37232 | 43292.9 |
| hypothetical protein | FD720_00270 | Not Available | Negative | 37513 - 38007 | 18906.4 |
| vwa domain-containing protein | FD720_00275 | Not Available | Negative | 38116 - 39876 | 64263.3 |
| duf3150 domain-containing protein | FD720_00280 | Not Available | Negative | 39945 - 41249 | 48555.1 |
| endonuclease | FD720_00285 | Not Available | Negative | 41924 - 42934 | 39357.8 |
| phage recombination protein bet | FD720_00290 | Not Available | Negative | 42995 - 43999 | 37838.4 |
| hypothetical protein | FD720_00295 | Not Available | Negative | 44065 - 44946 | 33195.0 |
| cbbq/nirq/norq/gpvn family protein | FD720_00300 | Not Available | Negative | 44956 - 45927 | 35932.3 |
| hypothetical protein | FD720_00305 | Not Available | Negative | 46690 - 47007 | 11566.0 |
| hypothetical protein | FD720_00310 | Not Available | Negative | 47269 - 47490 | 7252.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
