Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-deoxynucleotidase | FD720_00160 | Not Available | Negative | 23129 - 23968 | 30682.7 |
| hypothetical protein | FD720_00165 | Not Available | Negative | 24254 - 24436 | 6527.19 |
| hypothetical protein | FD720_00170 | Not Available | Negative | 24552 - 24800 | 9464.79 |
| hypothetical protein | FD720_00175 | Not Available | Negative | 24868 - 25299 | 16397.1 |
| hypothetical protein | FD720_00180 | Not Available | Negative | 25732 - 26145 | 15741.8 |
| hypothetical protein | FD720_00185 | Not Available | Negative | 26440 - 26733 | 11114.1 |
| dna cytosine methyltransferase | FD720_00195 | Not Available | Negative | 27939 - 29573 | 60098.1 |
| hypothetical protein | FD720_00200 | Not Available | Negative | 29635 - 29973 | 12631.0 |
| hypothetical protein | FD720_00205 | Not Available | Negative | 30169 - 30348 | 6654.01 |
| hypothetical protein | FD720_00210 | Not Available | Negative | 30438 - 30752 | 12139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
