Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_00110 | Not Available | Negative | 14881 - 16335 | 55496.4 |
| hypothetical protein | FD720_00115 | Not Available | Negative | 16708 - 17148 | 16485.4 |
| hypothetical protein | FD720_00120 | Not Available | Negative | 17226 - 17777 | 20737.1 |
| hypothetical protein | FD720_00125 | Not Available | Negative | 17858 - 18103 | 9239.95 |
| dna primase | FD720_00130 | Not Available | Negative | 18090 - 19868 | 66110.3 |
| hypothetical protein | FD720_00135 | Not Available | Negative | 20018 - 20578 | 21209.7 |
| hypothetical protein | FD720_00140 | Not Available | Negative | 20798 - 21355 | 21012.6 |
| ngrc | FD720_00145 | Not Available | Negative | 21438 - 22202 | 29331.3 |
| hypothetical protein | FD720_00150 | Not Available | Negative | 22429 - 22836 | 14599.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | FD720_00155 | Not Available | Negative | 22899 - 23132 | 8983.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
