Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 70dps-OG12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nerd domain-containing protein | FD720_00060 | Not Available | Positive | 7624 - 8232 | 23226.1 |
| duf2913 family protein | FD720_00065 | Not Available | Negative | 8281 - 8892 | 23556.2 |
| hypothetical protein | FD720_00070 | Not Available | Positive | 9152 - 10102 | 35672.8 |
| hypothetical protein | FD720_00075 | Not Available | Positive | 10105 - 10593 | 18388.1 |
| hypothetical protein | FD720_00080 | Not Available | Negative | 10590 - 11378 | 28876.3 |
| integrase | FD720_00085 | Not Available | Negative | 11380 - 12348 | 36811.7 |
| hypothetical protein | FD720_00090 | Not Available | Negative | 12406 - 12954 | 20710.9 |
| hypothetical protein | FD720_00095 | Not Available | Negative | 13105 - 13386 | 10622.8 |
| hypothetical protein | FD720_00100 | Not Available | Negative | 13390 - 13581 | 7605.59 |
| helix-turn-helix transcriptional regulator | FD720_00105 | Not Available | Positive | 14585 - 14878 | 11211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
