Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_04980 | Not Available | Positive | 1071569 - 1071922 | 13070.2 |
| duf2971 domain-containing protein | FD721_04985 | Not Available | Negative | 1072104 - 1072973 | 32976.1 |
| abc transporter atp-binding protein | FD721_04995 | Not Available | Positive | 1074921 - 1075592 | 24637.9 |
| ftsx-like permease family protein | FD721_05000 | Not Available | Positive | 1075573 - 1078038 | 91484.2 |
| carotenoid 1,2-hydratase | FD721_05005 | Not Available | Positive | 1078038 - 1079117 | 41085.7 |
| amidohydrolase | FD721_05010 | Not Available | Positive | 1079200 - 1080441 | 44956.3 |
| hypothetical protein | FD721_05015 | Not Available | Positive | 1080846 - 1083068 | 84342.7 |
| hypothetical protein | FD721_05020 | Not Available | Positive | 1083111 - 1084718 | 59226.4 |
| duf1656 domain-containing protein | FD721_05025 | Not Available | Positive | 1084724 - 1084927 | 7670.73 |
| hlyd family secretion protein | FD721_05030 | Not Available | Positive | 1084935 - 1085831 | 33210.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
