Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | FD721_04930 | Not Available | Positive | 1057840 - 1059072 | 46370.1 |
| bcct family transporter | FD721_04935 | Not Available | Negative | 1059186 - 1060739 | 54991.1 |
| duf417 family protein | FD721_04940 | Not Available | Positive | 1061134 - 1061628 | 18245.7 |
| mfs transporter | FD721_04945 | Not Available | Positive | 1061765 - 1063006 | 44843.2 |
| peptidase m23 | FD721_04950 | Not Available | Positive | 1062996 - 1063661 | 24924.4 |
| atp-dependent rna helicase hrpa | FD721_04955 | Not Available | Negative | 1063773 - 1067687 | 150571.0 |
| zinc transporter zntb | FD721_04960 | Not Available | Positive | 1068027 - 1068992 | 36634.9 |
| terb family tellurite resistance protein | FD721_04965 | Not Available | Positive | 1069074 - 1069529 | 17126.5 |
| protein kinase | FD721_04970 | Not Available | Positive | 1069688 - 1070899 | 44820.9 |
| glutaredoxin family protein | FD721_04975 | Not Available | Positive | 1070920 - 1071153 | 8964.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
