Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cidb/lrgb family autolysis modulator | FD721_04830 | Not Available | Positive | 1035930 - 1036610 | 24302.9 |
| cytidine deaminase | FD721_04835 | Not Available | Positive | 1036805 - 1037692 | 31832.9 |
| dmt family transporter | FD721_04840 | Not Available | Positive | 1037880 - 1038752 | 31821.7 |
| formate-dependent phosphoribosylglycinamide formyltransferase | FD721_04845 | Not Available | Positive | 1038926 - 1040101 | 42587.0 |
| thiopurine s-methyltransferase | FD721_04850 | Not Available | Negative | 1040201 - 1040839 | 24363.0 |
| hypothetical protein | FD721_04855 | Not Available | Negative | 1041152 - 1041445 | 11299.7 |
| nitrous oxide-stimulated promoter family protein | FD721_04860 | Not Available | Positive | 1041684 - 1042112 | 16760.4 |
| spore gernimation protein | FD721_04865 | Not Available | Negative | 1042285 - 1042653 | 13366.2 |
| atp-dependent rna helicase | FD721_04870 | Not Available | Negative | 1042682 - 1045138 | 92344.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | FD721_04875 | Not Available | Positive | 1045342 - 1046238 | 33482.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
