Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retention module-containing protein | FD721_04780 | Not Available | Negative | 1023957 - 1024597 | 22790.3 |
| tolc family outer membrane protein | FD721_04785 | Not Available | Positive | 1024893 - 1026185 | 48088.5 |
| ompa family protein | FD721_04790 | Not Available | Positive | 1026189 - 1026779 | 21858.2 |
| hypothetical protein | FD721_04795 | Not Available | Positive | 1026797 - 1028026 | 43384.1 |
| hypothetical protein | FD721_04800 | Not Available | Positive | 1028092 - 1030887 | 104356.0 |
| lysr family transcriptional regulator | FD721_04805 | Not Available | Negative | 1030927 - 1031841 | 34576.8 |
| eama family transporter | FD721_04810 | Not Available | Positive | 1031934 - 1032860 | 34534.6 |
| exodeoxyribonuclease i | FD721_04815 | Not Available | Positive | 1033338 - 1034759 | 54524.8 |
| hypothetical protein | FD721_04820 | Not Available | Positive | 1034901 - 1035416 | 19720.5 |
| hypothetical protein | FD721_04825 | Not Available | Positive | 1035589 - 1035933 | 12444.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
