Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | FD721_04680 | Not Available | Positive | 1005783 - 1006391 | 22830.2 |
| duf1145 domain-containing protein | FD721_04685 | Not Available | Positive | 1006388 - 1006654 | 9973.06 |
| duf2492 family protein | FD721_04690 | Not Available | Negative | 1006728 - 1006970 | 9040.82 |
| hypothetical protein | FD721_04695 | Not Available | Positive | 1007764 - 1007844 | 2900.87 |
| duf4145 domain-containing protein | FD721_04700 | Not Available | Negative | 1007946 - 1008311 | 14238.3 |
| duf2500 domain-containing protein | FD721_04705 | Not Available | Positive | 1008646 - 1008978 | 12682.5 |
| acyltransferase | FD721_04710 | Not Available | Negative | 1008988 - 1010001 | 38658.9 |
| sdr family oxidoreductase | FD721_04715 | Not Available | Negative | 1010101 - 1010823 | 25959.4 |
| abgt family transporter | FD721_04720 | Not Available | Positive | 1011297 - 1012898 | 56703.5 |
| lysr family transcriptional regulator | FD721_04725 | Not Available | Positive | 1013011 - 1013859 | 31741.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
