Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | FD721_04630 | Not Available | Positive | 995108 - 995530 | 15715.2 |
| glycerol-3-phosphate dehydrogenase | FD721_04635 | Not Available | Negative | 995609 - 997126 | 56836.7 |
| deor/glpr family transcriptional regulator | FD721_04640 | Not Available | Negative | 997343 - 998104 | 28202.8 |
| glycerol-3-phosphate transporter | FD721_04645 | Not Available | Negative | 998241 - 999605 | 50610.2 |
| rhomboid family intramembrane serine protease glpg | FD721_04650 | Not Available | Negative | 999934 - 1000779 | 31884.1 |
| thiosulfate sulfurtransferase glpe | FD721_04655 | Not Available | Negative | 1000811 - 1001140 | 12373.5 |
| rna polymerase sigma factor rpoh | FD721_04660 | Not Available | Negative | 1001713 - 1002576 | 32829.9 |
| cell division protein ftsx | FD721_04665 | Not Available | Negative | 1002722 - 1003591 | 32134.7 |
| cell division atp-binding protein ftse | FD721_04670 | Not Available | Negative | 1003635 - 1004306 | 25027.6 |
| signal recognition particle-docking protein ftsy | FD721_04675 | Not Available | Negative | 1004310 - 1005698 | 50373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
