Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | FD721_04525 | Not Available | Positive | 975345 - 976256 | 33481.1 |
| sdr family oxidoreductase | FD721_04530 | Not Available | Positive | 976850 - 978841 | 74109.1 |
| duf2505 domain-containing protein | FD721_04535 | Not Available | Positive | 978852 - 979361 | 18784.2 |
| tetr/acrr family transcriptional regulator | FD721_04540 | Not Available | Positive | 979483 - 980115 | 24704.9 |
| hypothetical protein | FD721_04545 | Not Available | Negative | 980210 - 980821 | 23384.5 |
| hypothetical protein | FD721_04550 | Not Available | Negative | 980884 - 981243 | 13532.1 |
| is91 family transposase | FD721_04560 | Not Available | Positive | 982470 - 982564 | 3450.99 |
| hypothetical protein | FD721_04565 | Not Available | Negative | 982656 - 982967 | 11510.0 |
| cytochrome oxidase | FD721_04570 | Not Available | Negative | 982977 - 983567 | 21996.3 |
| surf1 family protein | FD721_04575 | Not Available | Negative | 983551 - 984273 | 28386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
