Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00410 | Not Available | Negative | 71592 - 72800 | 45192.5 |
| is3 family transposase | FD721_00415 | Not Available | Positive | 73139 - 74262 | 43311.9 |
| hypothetical protein | FD721_00420 | Not Available | Negative | 74369 - 75130 | 29498.7 |
| dna topoisomerase iii | FD721_00425 | Not Available | Negative | 75243 - 77450 | 81872.6 |
| hypothetical protein | FD721_00430 | Not Available | Negative | 77451 - 77753 | 10869.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 78140 - 78569 | Not Available |
| hypothetical protein | FD721_00435 | Not Available | Negative | 77735 - 78508 | 28715.7 |
| hypothetical protein | FD721_00440 | Not Available | Negative | 78513 - 78752 | 8864.31 |
| conjugal transfer protein trai | FD721_00445 | Not Available | Positive | 78916 - 81990 | 113292.0 |
| conjugative transfer system coupling protein trad | FD721_00450 | Not Available | Positive | 81997 - 83865 | 69498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
