Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacylase | FD721_04475 | Not Available | Negative | 964490 - 965206 | 26595.5 |
| formate dehydrogenase subunit gamma | FD721_04480 | Not Available | Negative | 965417 - 966454 | 39171.0 |
| 4fe-4s dicluster domain-containing protein | FD721_04485 | Not Available | Negative | 966573 - 967196 | 22122.6 |
| formate dehydrogenase | FD721_04490 | Not Available | Negative | 967208 - 970069 | 106845.0 |
| twin-arginine translocation signal domain-containing protein | FD721_04495 | Not Available | Negative | 970085 - 970285 | 7294.58 |
| molecular chaperone | FD721_04500 | Not Available | Negative | 970379 - 970993 | 22830.2 |
| 4fe-4s dicluster domain-containing protein | FD721_04505 | Not Available | Negative | 971000 - 972658 | 60419.9 |
| duf3306 domain-containing protein | FD721_04510 | Not Available | Negative | 972950 - 973690 | 27062.2 |
| duf3305 domain-containing protein | FD721_04515 | Not Available | Negative | 973680 - 974174 | 19062.6 |
| formate dehydrogenase accessory sulfurtransferase fdhd | FD721_04520 | Not Available | Positive | 974433 - 975329 | 32806.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
