Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate/nitrate reduction transcriptional regulator fnr | FD721_04375 | Not Available | Positive | 943894 - 944649 | 28290.4 |
| universal stress protein uspe | FD721_04380 | Not Available | Positive | 944929 - 945870 | 35223.1 |
| hypothetical protein | FD721_04385 | Not Available | Negative | 945952 - 946299 | 12589.2 |
| trna 2-thiocytidine(32) synthetase ttca | FD721_04390 | Not Available | Positive | 946655 - 947584 | 35183.3 |
| trypsin-like serine protease | FD721_04395 | Not Available | Positive | 947782 - 949503 | 63302.5 |
| hypothetical protein | FD721_04400 | Not Available | Positive | 949507 - 950262 | 28552.7 |
| d-alanyl-d-alanine carboxypeptidase | FD721_04405 | Not Available | Negative | 950394 - 951566 | 42702.1 |
| carboxypeptidase m32 | FD721_04410 | Not Available | Positive | 951903 - 953384 | 56066.2 |
| hypothetical protein | FD721_04415 | Not Available | Positive | 953551 - 953856 | 11681.4 |
| res domain-containing protein | FD721_04420 | Not Available | Negative | 953909 - 954583 | 25280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
