Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | FD721_04325 | Not Available | Positive | 935114 - 935839 | 26050.1 |
| hypothetical protein | FD721_04330 | Not Available | Negative | 935979 - 936422 | 16186.8 |
| cytochrome-c oxidase, cbb3-type subunit i | FD721_04335 | Not Available | Positive | 936701 - 938131 | 53412.7 |
| cytochrome-c oxidase, cbb3-type subunit ii | FD721_04340 | Not Available | Positive | 938143 - 938754 | 23022.6 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | FD721_04345 | Not Available | Positive | 938765 - 938944 | 6892.23 |
| cytochrome-c oxidase, cbb3-type subunit iii | FD721_04350 | Not Available | Positive | 938941 - 939933 | 36146.8 |
| nitrogen fixation protein fixh | FD721_04355 | Not Available | Positive | 940029 - 940520 | 18939.8 |
| heavy metal translocating p-type atpase | FD721_04360 | Not Available | Positive | 940517 - 942937 | 89091.5 |
| cbb3-type cytochrome oxidase assembly protein ccos | FD721_04365 | Not Available | Positive | 942938 - 943138 | 7562.0 |
| sulfite exporter taue/safe family protein | FD721_04370 | Not Available | Positive | 943141 - 943818 | 24357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
