Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | FD721_04275 | Not Available | Positive | 922974 - 924890 | 68864.5 |
| molecular chaperone dnaj | FD721_04280 | Not Available | Positive | 924987 - 926126 | 40995.6 |
| type iv pilin protein | FD721_04285 | Not Available | Negative | 926185 - 926577 | 14292.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FD721_04290 | Not Available | Positive | 926713 - 927264 | 20456.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FD721_04295 | Not Available | Positive | 927251 - 927847 | 21739.9 |
| hypothetical protein | FD721_04300 | Not Available | Positive | 927847 - 929088 | 46231.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FD721_04305 | Not Available | Positive | 929078 - 929509 | 15440.6 |
| isncy family transposase | FD721_04310 | Not Available | Negative | 930087 - 931295 | 47229.7 |
| response regulator | FD721_04315 | Not Available | Negative | 931693 - 933774 | 78447.3 |
| hypothetical protein | FD721_04320 | Not Available | Negative | 933779 - 934954 | 42477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
