Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sufs family cysteine desulfurase | FD721_04125 | Not Available | Negative | 890074 - 891291 | 45459.7 |
| fe-s cluster assembly protein sufd | FD721_04130 | Not Available | Negative | 891288 - 892559 | 47653.9 |
| fe-s cluster assembly atpase sufc | FD721_04135 | Not Available | Negative | 892537 - 893280 | 27515.9 |
| fe-s cluster assembly protein sufb | FD721_04140 | Not Available | Negative | 893283 - 894761 | 54693.1 |
| iron-sulfur cluster assembly accessory protein | FD721_04145 | Not Available | Negative | 894765 - 895133 | 13384.9 |
| maltose abc transporter permease malg | FD721_04150 | Not Available | Negative | 895500 - 896390 | 32050.1 |
| maltose abc transporter permease malf | FD721_04155 | Not Available | Negative | 896402 - 897997 | 58601.9 |
| maltose/maltodextrin abc transporter substrate-binding protein male | FD721_04160 | Not Available | Negative | 898067 - 899248 | 42496.5 |
| maltose/maltodextrin abc transporter atp-binding protein malk | FD721_04165 | Not Available | Positive | 899677 - 900783 | 40890.5 |
| rhs repeat protein | FD721_04170 | Not Available | Positive | 901304 - 904656 | 127522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
