Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | FD721_04030 | Not Available | Negative | 869255 - 869923 | 23641.2 |
| lysr family transcriptional regulator | FD721_04035 | Not Available | Positive | 870044 - 870982 | 35117.0 |
| porin family protein | FD721_04040 | Not Available | Negative | 871018 - 871590 | 21180.8 |
| hypothetical protein | FD721_04045 | Not Available | Negative | 871680 - 872258 | 22042.8 |
| cyclic nucleotide-binding/cbs domain-containing protein | FD721_04050 | Not Available | Positive | 872587 - 874464 | 70822.4 |
| 3'-5' exonuclease | FD721_04055 | Not Available | Positive | 874461 - 875210 | 28123.7 |
| bcct family transporter | FD721_04060 | Not Available | Positive | 875399 - 877063 | 59543.4 |
| udp-glucose 4-epimerase gale | FD721_04065 | Not Available | Positive | 877266 - 878312 | 37679.0 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | FD721_04070 | Not Available | Positive | 878391 - 879443 | 40577.9 |
| galactokinase | FD721_04075 | Not Available | Positive | 879542 - 880702 | 42280.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
