Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00360 | Not Available | Positive | 61114 - 61347 | 8879.1 |
| hypothetical protein | FD721_00365 | Not Available | Positive | 61409 - 63370 | 75546.8 |
| hypothetical protein | FD721_00370 | Not Available | Positive | 63367 - 63960 | 22594.0 |
| hypothetical protein | FD721_00375 | Not Available | Positive | 64252 - 64584 | 12722.2 |
| hypothetical protein | FD721_00380 | Not Available | Positive | 64596 - 64826 | 8503.15 |
| type iii restriction-modification system endonuclease | FD721_00385 | Not Available | Negative | 64976 - 67891 | 111111.0 |
| site-specific dna-methyltransferase | FD721_00390 | Not Available | Negative | 67893 - 69776 | 72036.8 |
| hypothetical protein | FD721_00395 | Not Available | Negative | 69804 - 70046 | 8825.73 |
| hypothetical protein | FD721_00400 | Not Available | Negative | 70366 - 71082 | 26315.1 |
| hypothetical protein | FD721_00405 | Not Available | Negative | 71179 - 71583 | 14503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
