Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 857440 - 857516 | Not Available |
| cytochrome c5 family protein | FD721_03985 | Not Available | Positive | 857795 - 858205 | 14520.4 |
| dna helicase rep | FD721_03990 | Not Available | Negative | 858282 - 860300 | 77511.4 |
| tetr/acrr family transcriptional regulator | FD721_03995 | Not Available | Positive | 860490 - 861056 | 21505.1 |
| efflux rnd transporter periplasmic adaptor subunit | FD721_04000 | Not Available | Positive | 861080 - 862186 | 40674.0 |
| multidrug efflux rnd transporter permease subunit | FD721_04005 | Not Available | Positive | 862199 - 865315 | 112284.0 |
| accessory factor ubik family protein | FD721_04010 | Not Available | Positive | 865449 - 865709 | 9943.0 |
| ketol-acid reductoisomerase | FD721_04015 | Not Available | Negative | 865787 - 867274 | 55077.8 |
| hth-type transcriptional activator ilvy | FD721_04020 | Not Available | Positive | 867402 - 868280 | 32579.4 |
| mfs transporter | FD721_04025 | Not Available | Negative | 868427 - 869155 | 25854.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
