Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | FD721_03880 | Not Available | Negative | 838936 - 839691 | 28176.0 |
| sec-independent protein translocase subunit tatb | FD721_03885 | Not Available | Negative | 839703 - 840050 | 12986.6 |
| twin-arginine translocase subunit tata | FD721_03890 | Not Available | Negative | 840054 - 840314 | 9464.37 |
| ubiquinone biosynthesis regulatory protein kinase ubib | FD721_03895 | Not Available | Negative | 840389 - 842023 | 63062.4 |
| scp2 domain-containing protein | FD721_03900 | Not Available | Negative | 842033 - 842635 | 22221.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | FD721_03905 | Not Available | Negative | 842644 - 843399 | 28123.8 |
| dna recombination protein rmuc | FD721_03910 | Not Available | Negative | 843522 - 845048 | 57948.8 |
| dmt family transporter | FD721_03915 | Not Available | Positive | 845262 - 846161 | 32829.1 |
| multidrug effflux mfs transporter | FD721_03920 | Not Available | Negative | 846232 - 847434 | 42962.9 |
| aminopeptidase p family protein | FD721_03925 | Not Available | Positive | 847685 - 849475 | 65466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
