Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | FD721_03730 | Not Available | Negative | 812725 - 813888 | 40745.9 |
| erythrose-4-phosphate dehydrogenase | FD721_03735 | Not Available | Negative | 813963 - 815003 | 38416.6 |
| transketolase | FD721_03740 | Not Available | Negative | 815292 - 817304 | 72626.8 |
| methionine adenosyltransferase | FD721_03745 | Not Available | Positive | 817722 - 818876 | 42059.1 |
| sprt family zinc-dependent metalloprotease | FD721_03750 | Not Available | Positive | 818979 - 819461 | 18657.6 |
| deoxyribonuclease i | FD721_03755 | Not Available | Positive | 819592 - 820296 | 27155.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | FD721_03760 | Not Available | Positive | 820428 - 821159 | 27004.7 |
| glutathione synthase | FD721_03765 | Not Available | Positive | 821180 - 822127 | 35233.7 |
| yqge/algh family protein | FD721_03770 | Not Available | Positive | 822281 - 822844 | 20539.3 |
| holliday junction resolvase ruvx | FD721_03775 | Not Available | Positive | 822841 - 823266 | 15721.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
