Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-6-methoxyphenyl hydroxylase | FD721_03675 | Not Available | Negative | 802893 - 804080 | 43268.9 |
| yeca family protein | FD721_03680 | Not Available | Negative | 804124 - 804699 | 20648.1 |
| cell division protein zapa | FD721_03685 | Not Available | Positive | 805026 - 805328 | 11303.5 |
| 5-formyltetrahydrofolate cyclo-ligase | FD721_03695 | Not Available | Positive | 805653 - 806234 | 22453.1 |
| ribose-5-phosphate isomerase rpia | FD721_03700 | Not Available | Positive | 806436 - 807095 | 23197.0 |
| phosphoglycerate dehydrogenase | FD721_03705 | Not Available | Positive | 807386 - 808615 | 44647.8 |
| oxidative stress defense protein | FD721_03710 | Not Available | Negative | 808683 - 809411 | 26393.3 |
| ybak/ebsc family protein | FD721_03715 | Not Available | Positive | 809658 - 810188 | 19868.9 |
| small-conductance mechanosensitive channel mscs | FD721_03720 | Not Available | Negative | 810274 - 811158 | 31756.6 |
| class ii fructose-bisphosphate aldolase | FD721_03725 | Not Available | Negative | 811508 - 812584 | 38831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
