Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00712 | FD721_03625 | Not Available | Positive | 796327 - 797298 | Not Available |
| ybak/ebsc family protein | FD721_03630 | Not Available | Positive | 797305 - 797772 | 16851.8 |
| hypothetical protein | FD721_03635 | Not Available | Positive | 797950 - 798321 | 14051.4 |
| lysr family transcriptional regulator | FD721_03640 | Not Available | Positive | 798408 - 799340 | 35552.9 |
| (na+)-nqr maturation nqrm | FD721_03645 | Not Available | Negative | 799432 - 799626 | 6977.72 |
| hypothetical protein | FD721_03650 | Not Available | Negative | 799623 - 800096 | 16877.8 |
| duf134 domain-containing protein | FD721_03655 | Not Available | Negative | 800097 - 800390 | 10808.4 |
| duf1107 domain-containing protein | FD721_03660 | Not Available | Positive | 800887 - 801090 | 8006.86 |
| glycine cleavage system protein gcvh | FD721_03665 | Not Available | Negative | 801162 - 801557 | 14322.3 |
| fad-dependent 2-octaprenylphenol hydroxylase | FD721_03670 | Not Available | Negative | 801685 - 802887 | 44231.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
