Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | FD721_03575 | Not Available | Negative | 786957 - 787631 | 25032.9 |
| signal peptidase i | FD721_03580 | Not Available | Negative | 787642 - 788532 | 33159.2 |
| elongation factor 4 | FD721_03585 | Not Available | Negative | 788681 - 790477 | 66057.5 |
| transcriptional regulator | FD721_03590 | Not Available | Negative | 790555 - 791052 | 17469.4 |
| sigma-e factor regulatory protein rseb | FD721_03595 | Not Available | Negative | 791067 - 792047 | 36580.1 |
| anti-sigma e factor | FD721_03600 | Not Available | Negative | 792047 - 792697 | 23594.6 |
| rna polymerase sigma factor rpoe | FD721_03605 | Not Available | Negative | 792721 - 793299 | 21879.1 |
| l-aspartate oxidase | FD721_03610 | Not Available | Positive | 793713 - 795329 | 60153.3 |
| hypothetical protein | FD721_03615 | Not Available | Negative | 795377 - 795874 | 19764.4 |
| succinate dehydrogenase assembly factor 2 | FD721_03620 | Not Available | Negative | 795798 - 796058 | 9843.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
