Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | FD721_03370 | Not Available | Negative | 739433 - 739885 | 17166.3 |
| leucyl aminopeptidase | FD721_03375 | Not Available | Negative | 739990 - 741498 | 54454.7 |
| lps export abc transporter permease lptf | FD721_03380 | Not Available | Positive | 741693 - 742793 | 40712.4 |
| lps export abc transporter permease lptg | FD721_03385 | Not Available | Positive | 742793 - 743863 | 39600.9 |
| rdd family protein | FD721_03390 | Not Available | Negative | 743933 - 744424 | 17925.1 |
| Trna-leu | Not Available | Not Available | Positive | 744733 - 744818 | Not Available |
| lysine decarboxylase | FD721_03400 | Not Available | Negative | 745025 - 747154 | 79980.8 |
| cadaverine/lysine antiporter | FD721_03405 | Not Available | Negative | 747266 - 748606 | 46955.8 |
| transcriptional regulator | FD721_03410 | Not Available | Negative | 749231 - 750676 | 55502.8 |
| lysine--trna ligase | FD721_03415 | Not Available | Positive | 750953 - 752461 | 58017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
