Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tray domain-containing protein | FD721_03255 | Not Available | Positive | 713933 - 714121 | 7179.54 |
| duf2971 domain-containing protein | FD721_03260 | Not Available | Negative | 715014 - 715832 | 31176.3 |
| duf885 domain-containing protein | FD721_03265 | Not Available | Positive | 716451 - 718478 | 76327.8 |
| hypothetical protein | FD721_03270 | Not Available | Positive | 718870 - 719088 | 8191.64 |
| hit family protein | FD721_03275 | Not Available | Negative | 719361 - 719834 | 17710.0 |
| hypothetical protein | FD721_03280 | Not Available | Negative | 719985 - 720206 | 8540.06 |
| nad(p)h-dependent oxidoreductase | FD721_03290 | Not Available | Negative | 720967 - 721494 | 19138.7 |
| antibiotic biosynthesis monooxygenase | FD721_03295 | Not Available | Positive | 721803 - 722093 | 10787.8 |
| hypothetical protein | FD721_03300 | Not Available | Negative | 722156 - 722425 | 10065.0 |
| duf4102 domain-containing protein | FD721_03310 | Not Available | Negative | 722630 - 723019 | 14875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
