Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | FD721_03200 | Not Available | Negative | 696253 - 696597 | 12713.4 |
| amidohydrolase | FD721_03205 | Not Available | Positive | 696868 - 698685 | 66744.7 |
| hypothetical protein | FD721_03210 | Not Available | Negative | 698757 - 699143 | 14464.3 |
| hypothetical protein | FD721_03220 | Not Available | Negative | 699451 - 701058 | 57208.2 |
| hypothetical protein | FD721_03225 | Not Available | Negative | 701344 - 706875 | 198878.0 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | FD721_03230 | Not Available | Positive | 707143 - 708573 | 53575.0 |
| duf496 family protein | FD721_03235 | Not Available | Negative | 708805 - 709125 | 12797.4 |
| ig-like domain-containing protein | FD721_03240 | Not Available | Negative | 709390 - 712287 | 102864.0 |
| hypothetical protein | FD721_03245 | Not Available | Negative | 712288 - 712658 | 14289.3 |
| helix-turn-helix transcriptional regulator | FD721_03250 | Not Available | Negative | 713129 - 713755 | 23897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
