Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin adenylyltransferase | FD721_03055 | Not Available | Positive | 664772 - 665305 | 19356.4 |
| exoribonuclease r | FD721_03060 | Not Available | Negative | 665428 - 665892 | 18240.6 |
| penicillin-binding protein 1b | FD721_03065 | Not Available | Positive | 666227 - 668503 | 84195.1 |
| hypothetical protein | FD721_03070 | Not Available | Positive | 668786 - 669055 | 10404.5 |
| sh3 domain-containing protein | FD721_03075 | Not Available | Positive | 669253 - 669882 | 22715.1 |
| trap transporter large permease subunit | FD721_03080 | Not Available | Positive | 670189 - 671544 | 47815.5 |
| hypothetical protein | FD721_03085 | Not Available | Negative | 671691 - 672056 | 13446.0 |
| hypothetical protein | FD721_03090 | Not Available | Negative | 672161 - 672553 | 14621.3 |
| hypothetical protein | FD721_03095 | Not Available | Positive | 672778 - 673062 | 10693.9 |
| murr/rpir family transcriptional regulator | FD721_03100 | Not Available | Positive | 673249 - 674106 | 32503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
