Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactosyl transferase | FD721_03005 | Not Available | Positive | 657471 - 659162 | 64466.8 |
| nudix domain-containing protein | FD721_03010 | Not Available | Positive | 659281 - 659820 | 20591.4 |
| hypothetical protein | FD721_03015 | Not Available | Positive | 659824 - 660039 | 8252.24 |
| leucine-rich repeat domain-containing protein | FD721_03020 | Not Available | Positive | 660050 - 660538 | 18260.8 |
| hypothetical protein | FD721_03025 | Not Available | Negative | 660612 - 660992 | 14435.2 |
| dead/deah box helicase | FD721_03030 | Not Available | Negative | 661148 - 662443 | 47568.4 |
| duf3010 family protein | FD721_03035 | Not Available | Negative | 662619 - 663041 | 16092.6 |
| hypothetical protein | FD721_03040 | Not Available | Negative | 663215 - 663565 | 13603.8 |
| m48 family metallopeptidase | FD721_03045 | Not Available | Negative | 663636 - 664142 | 19822.4 |
| isoprenylcysteine carboxylmethyltransferase family protein | FD721_03050 | Not Available | Positive | 664249 - 664701 | 16873.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
