Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt transporter | FD721_02950 | Not Available | Negative | 647408 - 648499 | 38677.4 |
| duf1007 family protein | FD721_02955 | Not Available | Negative | 648522 - 649178 | 24848.7 |
| marr family transcriptional regulator | FD721_02960 | Not Available | Negative | 649404 - 649859 | 17198.2 |
| duf2955 domain-containing protein | FD721_02965 | Not Available | Negative | 649831 - 650850 | 38094.7 |
| hlyd family secretion protein | FD721_02970 | Not Available | Negative | 650863 - 651912 | 38289.4 |
| trna (pseudouridine(54)-n(1))-methyltransferase trmy | FD721_02975 | Not Available | Positive | 652053 - 652652 | 22263.9 |
| hypothetical protein | FD721_02980 | Not Available | Positive | 652675 - 653157 | 18151.5 |
| iron-containing alcohol dehydrogenase | FD721_02990 | Not Available | Negative | 653342 - 654490 | 41649.6 |
| flavodoxin family protein | FD721_02995 | Not Available | Positive | 654776 - 655390 | 23503.2 |
| potassium transporter | FD721_03000 | Not Available | Positive | 655396 - 657360 | 71586.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
