Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit | FD721_02900 | Not Available | Negative | 632666 - 635230 | 93784.1 |
| siroheme synthase | FD721_02905 | Not Available | Negative | 635396 - 636343 | 35953.2 |
| ybhb/ybcl family raf kinase inhibitor-like protein | FD721_02910 | Not Available | Negative | 636544 - 637098 | 19322.0 |
| lysr family transcriptional regulator | FD721_02915 | Not Available | Positive | 637279 - 638166 | 33961.2 |
| cation diffusion facilitator family transporter | FD721_02920 | Not Available | Positive | 638332 - 638649 | 12790.2 |
| duf5011 domain-containing protein | FD721_02925 | Not Available | Negative | 638750 - 640945 | 79484.5 |
| bcct family transporter | FD721_02930 | Not Available | Positive | 641419 - 643335 | 70106.8 |
| gnat family n-acetyltransferase | FD721_02935 | Not Available | Positive | 643469 - 644980 | 57469.5 |
| hypothetical protein | FD721_02940 | Not Available | Negative | 645031 - 645693 | 24814.9 |
| hypothetical protein | FD721_02945 | Not Available | Positive | 646007 - 647305 | 49641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
