Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | FD721_02800 | Not Available | Positive | 609438 - 610754 | 49408.4 |
| peroxide stress protein yaaa | FD721_02805 | Not Available | Negative | 610855 - 611628 | 29116.2 |
| alanine:cation symporter family protein | FD721_02810 | Not Available | Negative | 611800 - 613227 | 51272.3 |
| duf3545 family protein | FD721_02815 | Not Available | Positive | 613996 - 614178 | 7512.76 |
| hemerythrin domain-containing protein | FD721_02820 | Not Available | Negative | 614243 - 614773 | 21284.4 |
| uracil-dna glycosylase | FD721_02825 | Not Available | Negative | 614883 - 615542 | 24674.1 |
| deoxyribonuclease iv | FD721_02830 | Not Available | Negative | 615597 - 616439 | 31183.1 |
| autonomous glycyl radical cofactor grca | FD721_02835 | Not Available | Positive | 616805 - 617020 | 7564.98 |
| hypothetical protein | FD721_02840 | Not Available | Positive | 617242 - 617838 | 22910.5 |
| hypothetical protein | FD721_02845 | Not Available | Positive | 618412 - 618847 | 16352.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
