Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pace efflux transporter | FD721_02750 | Not Available | Positive | 597773 - 598216 | 17186.4 |
| sigma-54-dependent fis family transcriptional regulator | FD721_02755 | Not Available | Negative | 598284 - 599477 | 44903.7 |
| lysine--trna ligase | FD721_02760 | Not Available | Negative | 599711 - 601213 | 57041.2 |
| peptide chain release factor 2 | FD721_02765 | Not Available | Negative | 601246 - 602344 | 41046.7 |
| single-stranded-dna-specific exonuclease recj | FD721_02770 | Not Available | Negative | 602503 - 604227 | 62847.8 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FD721_02775 | Not Available | Negative | 604332 - 605063 | 26387.8 |
| site-specific tyrosine recombinase xerd | FD721_02780 | Not Available | Negative | 605237 - 606133 | 34492.8 |
| flavodoxin fldb | FD721_02785 | Not Available | Positive | 606307 - 606831 | 19660.0 |
| branched-chain amino acid transport system ii carrier protein | FD721_02790 | Not Available | Negative | 606906 - 608219 | 46203.7 |
| methyltransferase | FD721_02795 | Not Available | Positive | 608596 - 609309 | 25742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
