Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_02700 | Not Available | Negative | 586735 - 586980 | 9059.86 |
| na+/h+ antiporter nhaa | FD721_02705 | Not Available | Negative | 586985 - 588157 | 40718.7 |
| na/pi cotransporter family protein | FD721_02710 | Not Available | Positive | 588645 - 589790 | 40176.4 |
| thymidylate synthase | FD721_02715 | Not Available | Negative | 589958 - 590809 | 32604.8 |
| prolipoprotein diacylglyceryl transferase | FD721_02720 | Not Available | Negative | 591009 - 591812 | 29898.0 |
| sulfite exporter taue/safe family protein | FD721_02725 | Not Available | Negative | 591857 - 592663 | 27530.9 |
| phosphoenolpyruvate--protein phosphotransferase | FD721_02730 | Not Available | Negative | 592683 - 594941 | 84110.7 |
| rna pyrophosphohydrolase | FD721_02735 | Not Available | Negative | 594982 - 595503 | 20841.0 |
| dna mismatch repair endonuclease muth | FD721_02740 | Not Available | Positive | 596129 - 596797 | 24578.7 |
| lysr family transcriptional regulator | FD721_02745 | Not Available | Negative | 596794 - 597672 | 32277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
