Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | FD721_02600 | Not Available | Negative | 562196 - 563032 | 30493.9 |
| atp-dependent zinc metalloprotease ftsh | FD721_02605 | Not Available | Negative | 563101 - 565047 | 71703.2 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | FD721_02610 | Not Available | Negative | 565097 - 565726 | 23237.1 |
| ribosome assembly rna-binding protein yhby | FD721_02615 | Not Available | Positive | 565940 - 566236 | 11097.8 |
| transcription elongation factor grea | FD721_02620 | Not Available | Negative | 566369 - 566842 | 17597.1 |
| porin | FD721_02625 | Not Available | Positive | 567483 - 568499 | 36974.4 |
| serine-type d-ala-d-ala carboxypeptidase | FD721_02630 | Not Available | Positive | 568609 - 570003 | 51441.2 |
| magnesium transporter | FD721_02635 | Not Available | Negative | 570107 - 570958 | 30321.8 |
| carbamoyl-phosphate synthase large subunit | FD721_02640 | Not Available | Negative | 571525 - 574749 | 117767.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FD721_02645 | Not Available | Negative | 574766 - 575905 | 40873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
