Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_00210 | Not Available | Positive | 38411 - 38653 | 8695.75 |
| hypothetical protein | FD721_00215 | Not Available | Positive | 38865 - 39308 | 16702.6 |
| hypothetical protein | FD721_00220 | Not Available | Negative | 39499 - 39873 | 13506.0 |
| hypothetical protein | FD721_00225 | Not Available | Positive | 40223 - 41332 | 42441.4 |
| hypothetical protein | FD721_00230 | Not Available | Positive | 41329 - 42414 | 40109.6 |
| rhs repeat protein | FD721_00235 | Not Available | Positive | 43183 - 46323 | 116344.0 |
| phosphoglucosamine mutase | FD721_00240 | Not Available | Negative | 46363 - 46665 | 11074.5 |
| sulfonamide-resistant dihydropteroate synthase sul2 | FD721_00245 | Not Available | Negative | 46752 - 47567 | 28471.1 |
| hypothetical protein | FD721_00255 | Not Available | Positive | 47904 - 48107 | 7297.65 |
| hypothetical protein | FD721_00260 | Not Available | Positive | 48098 - 48319 | 8377.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
