Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | FD721_02450 | Not Available | Positive | 528757 - 529980 | 45568.2 |
| duf3581 family protein | FD721_02455 | Not Available | Negative | 530044 - 530763 | 27070.4 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | FD721_02460 | Not Available | Negative | 531639 - 533423 | 64681.7 |
| molybdenum cofactor guanylyltransferase moba | FD721_02465 | Not Available | Negative | 533410 - 534003 | 21897.2 |
| energy-coupling factor abc transporter atp-binding protein | FD721_02470 | Not Available | Negative | 533990 - 534694 | 26419.0 |
| abc transporter permease subunit | FD721_02475 | Not Available | Negative | 534714 - 535415 | 25317.8 |
| tungsten abc transporter substrate-binding protein | FD721_02480 | Not Available | Negative | 535501 - 536325 | 30141.3 |
| sigma-54-dependent fis family transcriptional regulator | FD721_02485 | Not Available | Positive | 536617 - 538086 | 55070.9 |
| two-component sensor histidine kinase | FD721_02490 | Not Available | Positive | 538088 - 540133 | 77591.3 |
| hypothetical protein | FD721_02495 | Not Available | Positive | 540297 - 540572 | 10370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
