Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family multidrug efflux mfs transporter | FD721_02400 | Not Available | Positive | 518090 - 519280 | 42724.6 |
| duf2913 family protein | FD721_02405 | Not Available | Positive | 519289 - 519936 | 24192.7 |
| inosine/guanosine kinase | FD721_02410 | Not Available | Negative | 520141 - 521445 | 49077.3 |
| duf2786 domain-containing protein | FD721_02415 | Not Available | Negative | 521737 - 522435 | 26286.7 |
| hypothetical protein | FD721_02420 | Not Available | Positive | 522591 - 523574 | 38257.6 |
| duf411 domain-containing protein | FD721_02425 | Not Available | Negative | 523697 - 524143 | 16584.2 |
| helix-turn-helix transcriptional regulator | FD721_02430 | Not Available | Positive | 524870 - 525226 | 13283.1 |
| phosphatase pap2 family protein | FD721_02435 | Not Available | Negative | 525370 - 526083 | 27078.7 |
| pts sugar transporter | FD721_02440 | Not Available | Positive | 526482 - 527849 | 48588.2 |
| response regulator transcription factor | FD721_02445 | Not Available | Positive | 528012 - 528689 | 25392.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
