Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | FD721_02350 | Not Available | Positive | 506972 - 509350 | 91592.3 |
| yqha family protein | FD721_02355 | Not Available | Positive | 509432 - 509941 | 18897.0 |
| hypothetical protein | FD721_02360 | Not Available | Negative | 509991 - 510308 | 11740.9 |
| duf1289 domain-containing protein | FD721_02365 | Not Available | Positive | 510592 - 510858 | 10633.7 |
| 50s ribosomal protein l25 | FD721_02370 | Not Available | Negative | 510916 - 511194 | 10472.7 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | FD721_02375 | Not Available | Positive | 511511 - 513667 | 80521.6 |
| dead/deah box helicase | FD721_02380 | Not Available | Negative | 513779 - 515521 | 66036.1 |
| hypothetical protein | FD721_02385 | Not Available | Positive | 515712 - 516206 | 18037.3 |
| gnat family n-acetyltransferase | FD721_02390 | Not Available | Negative | 516290 - 516784 | 18517.5 |
| 16s rrna pseudouridine(516) synthase rsua | FD721_02395 | Not Available | Positive | 517161 - 517859 | 26238.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
