Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | FD721_02245 | Not Available | Positive | 490265 - 491563 | 47006.3 |
| hypothetical protein | FD721_02255 | Not Available | Negative | 491999 - 492098 | 3607.37 |
| Trna-thr | Not Available | Not Available | Positive | 492199 - 492274 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 492285 - 492359 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 492397 - 492481 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 492497 - 492572 | Not Available |
| type iii pantothenate kinase | FD721_02280 | Not Available | Negative | 492669 - 493403 | 27157.9 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | FD721_02285 | Not Available | Negative | 493403 - 494359 | 34717.2 |
| udp-n-acetylmuramate dehydrogenase | FD721_02290 | Not Available | Negative | 494356 - 495393 | 37629.1 |
| gnat family n-acetyltransferase | FD721_02295 | Not Available | Positive | 495469 - 495897 | 16671.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
