Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | FD721_02195 | Not Available | Negative | 471578 - 476125 | 167971.0 |
| tigr01212 family radical sam protein | FD721_02200 | Not Available | Positive | 476769 - 477698 | 34624.6 |
| sensor domain-containing diguanylate cyclase | FD721_02205 | Not Available | Positive | 477890 - 479701 | 68692.9 |
| aerobic respiration two-component sensor histidine kinase arcb | FD721_02210 | Not Available | Positive | 479842 - 482208 | 89199.1 |
| two-component system response regulator arca | FD721_02215 | Not Available | Negative | 482287 - 483006 | 27412.9 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | FD721_02220 | Not Available | Positive | 483670 - 484164 | 17930.7 |
| hypothetical protein | FD721_02225 | Not Available | Negative | 484175 - 484654 | 17721.9 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FD721_02230 | Not Available | Negative | 484753 - 486477 | 67015.3 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | FD721_02235 | Not Available | Positive | 486847 - 489306 | 88474.2 |
| homoserine kinase | FD721_02240 | Not Available | Positive | 489308 - 490264 | 34498.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
